Snakemake Wrappers
0.19.1
Wrappers
BCFTOOLS
BOWTIE2
BWA
CUTADAPT
DELLY
EPIC
FASTQ_SCREEN
FASTQC
FREEBAYES
HISAT2
MULTIQC
NGS-DISAMBIGUATE
PICARD
Wrappers
PICARD ADDORREPLACEREADGROUPS
PICARD COLLECTALIGNMENTSUMMARYMETRICS
PICARD COLLECTHSMETRICS
PICARD COLLECTINSERTSIZEMETRICS
PICARD MARKDUPLICATES
PICARD MERGESAMFILES
PICARD SORTSAM
PINDEL
SAMBAMBA
SAMTOOLS
SICKLE
STAR
TRIMMOMATIC
VCF
Snakemake Wrappers
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PICARD
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Wrappers
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PICARD ADDORREPLACEREADGROUPS
PICARD COLLECTALIGNMENTSUMMARYMETRICS
PICARD COLLECTHSMETRICS
PICARD COLLECTINSERTSIZEMETRICS
PICARD MARKDUPLICATES
PICARD MERGESAMFILES
PICARD SORTSAM