Snakemake Wrappers
latest

Wrappers and Meta-Wrappers

  • Wrappers
    • ADAPTERREMOVAL
    • ARRIBA
    • ART
    • ASSEMBLY-STATS
    • BAMTOOLS
    • BAZAM
    • BBTOOLS
    • BCFTOOLS
      • BCFTOOLS CALL
      • BCFTOOLS CONCAT
      • BCFTOOLS FILTER
      • BCFTOOLS INDEX
      • BCFTOOLS MERGE
      • BCFTOOLS MPILEUP
      • BCFTOOLS NORM
      • BCFTOOLS REHEADER
      • BCFTOOLS SORT
      • BCFTOOLS STATS
      • BCFTOOLS VIEW
    • BEDTOOLS
    • BELLEROPHON
    • BENCHMARK
    • BGZIP
    • BIOBAMBAM2
    • BISMARK
    • BLAST
    • BOWTIE2
    • BUSCO
    • BUSTOOLS
    • BWA
    • BWA-MEM2
    • BWA-MEME
    • BWA-MEMX
    • CAIROSVG
    • CLUSTALO
    • COOLPUP.PY
    • COOLTOOLS
    • CUTADAPT
    • DADA2
    • DATAVZRD
    • DEEPTOOLS
    • DEEPVARIANT
    • DELLY
    • DIAMOND
    • DRAGMAP
    • EPIC
    • FASTP
    • FASTQ_SCREEN
    • FASTQC
    • FASTTREE
    • FGBIO
    • FILTLONG
    • FREEBAYES
    • GATK
    • GATK3
    • GDC-API
    • GDC-CLIENT
    • GENEFUSE
    • GENOMEPY
    • GENOMESCOPE
    • GFATOOLS
    • GRIDSS
    • HAP.PY
    • HIFIASM
    • HISAT2
    • HMMER
    • HOMER
    • IGV-REPORTS
    • INFERNAL
    • JANNOVAR
    • JELLYFISH
    • KALLISTO
    • LAST
    • LIFTOFF
    • LOFREQ
    • MACS2
    • MANTA
    • MAPDAMAGE2
    • MASHMAP
    • MERQURY
    • MERYL
    • MICROPHASER
    • MINIMAP2
    • MLST
    • MOSDEPTH
    • MSISENSOR
    • MULTIQC
    • MUSCLE
    • NANOSIM-H
    • NEXTFLOW
    • NGS-DISAMBIGUATE
    • OPEN-CRAVAT
    • OPTITYPE
    • PALADIN
    • PANDORA
    • PBMM2
    • PEAR
    • PICARD
    • PINDEL
    • PLASS
    • PRESEQ
    • PRETEXT
    • PRIMERCLIP
    • PROSOLO
    • PTRIMMER
    • PURGE_DUPS
    • PYFASTAQ
    • QUALIMAP
    • QUAST
    • RASUSA
    • RAZERS3
    • RBT
    • REBALER
    • REFERENCE
    • REFGENIE
    • RSEM
    • RUBIC
    • SALMON
    • SALSA2
    • SAMBAMBA
    • SAMTOOLS
    • SEQKIT
    • SEQTK
    • SHOVILL
    • SICKLE
    • SNP-MUTATOR
    • SNPEFF
    • SNPSIFT
    • SOURMASH
    • SPADES
    • SRA-TOOLS
    • STAR
    • STRELKA
    • STRLING
    • SUBREAD
    • TABIX
    • TRANSDECODER
    • TRIM_GALORE
    • TRIMMOMATIC
    • TRINITY
    • TXIMPORT
    • UCSC
    • UMIS
    • UNICYCLER
    • VARDICT
    • VARSCAN
    • VCFTOOLS
    • VEMBRANE
    • VEP
    • VERIFYBAMID
    • VG
    • VSEARCH
    • WGSIM
  • Meta-Wrappers

Development

  • Contributing
Snakemake Wrappers
  • Docs »
  • Wrappers »
  • BCFTOOLS
  • Edit on GitHub

BCFTOOLSΒΆ

For bcftools, the following wrappers are available:

  • BCFTOOLS CALL
  • BCFTOOLS CONCAT
  • BCFTOOLS FILTER
  • BCFTOOLS INDEX
  • BCFTOOLS MERGE
  • BCFTOOLS MPILEUP
  • BCFTOOLS NORM
  • BCFTOOLS REHEADER
  • BCFTOOLS SORT
  • BCFTOOLS STATS
  • BCFTOOLS VIEW
Next Previous

© Copyright 2016, The Snakemake team Revision 79342b73.

Built with Sphinx using a theme provided by Read the Docs.
Read the Docs v: latest
Versions
latest
stable
v1.25.0
v1.24.0
v1.23.5
v1.23.4
v1.23.3
v1.23.2
v1.23.1
v1.23.0
v1.22.0
v1.21.6
v1.21.5
v1.21.4
v1.21.3
v1.21.2
v1.21.1
v1.21.0
v1.20.0
v1.19.2
v1.19.1
v1.19.0
v1.18.3
v1.18.2
v1.18.1
v1.18.0
v1.17.5
v1.17.4
v1.17.3
v1.17.2
v1.17.1
v1.17.0
v1.16.0
v1.15.2
v1.15.1
v1.15.0
v1.14.1
v1.14.0
v1.13.0
v1.12.2
v1.12.1
v1.12.0
v1.11.0
v1.10.0
v1.9.0
v1.8.0
v1.7.2
v1.7.1
v1.7.0
v1.6.0
v1.5.0
v1.4.0
v1.3.2
v1.3.1
v1.3.0
v1.2.1
v1.2.0
v1.1.0
v1.0.0
v0.87.0
v0.86.0
v0.85.1
0.85.0
0.84.0
0.80.2
v0.80.1
0.80.1
0.80.0
0.79.0
0.78.0
0.77.0
0.76.0
v0.75.0
0.75.0
0.74.0
0.73.0
0.72.0
0.71.1
0.71.0
0.70.0
v0.69.0
0.69.0
0.68.0
0.67.0
0.66.0
0.65.0
0.64.0
0.63.0
0.62.0
0.61.0
0.60.1
0.60.0
0.59.2
0.59.1
0.59.0
0.58.0
0.57.0
0.56.0
0.55.1
0.55.0
0.54.0
0.53.0
0.52.0
0.51.3
0.51.2
0.51.1
0.51.0
0.50.4
0.50.3
0.50.2
0.50.1
0.50.0
0.49.0
0.48.0
0.47.0
0.46.0
0.45.1
0.40.2
0.40.1
0.40.0
0.39.0
0.38.1
0.38.0
0.37.1
0.37.0
0.36.0
0.35.2
0.35.1
0.35.0
0.34.0
0.33.0
0.32.0
0.31.1
0.31.0
0.30.0
0.29.0
0.28.0
0.27.1
0.27.0
0.26.1
0.26.0
0.25.0
0.24.0
0.23.1
0.23.0
0.22.0
0.21.0
0.20.1
0.20.0
0.19.4
0.19.3
0.19.2
0.19.1
0.19.0
0.18.0
0.17.4
0.17.3
0.17.2
0.17.1
0.17.0
0.16.0
0.15.4
0.15.3
0.15.1
0.15.0
0.14.2
0.14.1
0.14.0
0.13.2
0.13.1
0.13.0
0.12.0
0.11.0
0.10.0
0.9.0
0.8.0
0.7.0
0.6.0
0.5.0
0.4.0
0.3.0
0.2.0
0.1.0
v0.0.13
0.0.13
0.0.12
0.0.11
0.0.10
0.0.9
0.0.8
0.0.7
0.0.6
0.0.5
0.0.4
0.0.3
0.0.2
0.0.1
Downloads
html
On Read the Docs
Project Home
Builds

Free document hosting provided by Read the Docs.