Snakemake Wrappers
v0.75.0

Wrappers and Meta-Wrappers

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  • DADA2
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DADA2ΒΆ

For dada2, the following wrappers are available:

  • DADA2_ADD_SPECIES
  • DADA2_ASSIGN_SPECIES
  • DADA2_ASSIGN_TAXONOMY
  • DADA2_COLLAPSE_NOMISMATCH
  • DADA2_DEREPLICATE_FASTQ
  • DADA2_FILTER_TRIM
  • DADA2_LEARN_ERRORS
  • DADA2_MAKE_TABLE
  • DADA2_MERGE_PAIRS
  • DADA2_QUALITY_PROFILES
  • DADA2_REMOVE_CHIMERAS
  • DADA2_SAMPLE_INFERENCE
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